Just the boot. The aftermarket axles even if rebuilt might be worse than your original ones.
I assume you are serious, so please tell me what is the basis for your statement?
A new boot is 10 to 20 bucks. A good quality reman axle is $80 to $100. Whatever the labor rate is, your mechanic must figure he can replace the boot in less than $70 worth of time.
Why don't you ask your mechanic how long he would warranty each option?
If your mechanic is willing to warranty to the new boot option for a year, then go for that option.
Since I do my own work, I always put in remans. I've replaced a boot once and I see no value in the extra labor in doing so when I have never had a problem with a reman axle. Yes, there is junk out there, but there are quality remans as well. Your mechanic should know what reman to get.
You could also go to the dealer and get a new axle approximating the wholesale value of your car. That way you would have the assurance of OEM. Keep in mind that there are some BMW and Porsche owners in the US who don't wash their cars because they can't get enough German water.....